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katedry botaniky PřF UK v Praze

Metody Mikrosatelity Články týkající se mikrosatelitů
Články týkající se mikrosatelitů PDF Tisk Email
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Pátek, 27 Únor 2009 08:58
 

Obecná review
  • Jarne P., Lagoda P.J.L. (1996): Microsatellites, from molecules to populations and back. Trends in Ecology & Evolution 11, 424-429
  • Selkoe K.A. & Toonen R.J. (2006): Microsatellites for ecologists: a practical guide to using and evaluating microsatellite markers. Ecology Letters 9, 615–629.
  • Li Y.-H., Korol A.B., Fahima T., Beiles A. & Nevo E. (2002): Microsatellites: genomic distribution, putative functions and mutational mechanisms: a review. Molecular Ecology 11, 2453-2465.
  • Luikart G. & England P.R. (1999): Statistical analysis of microsatellite DNA data. Trends in Ecology & Evolution 14, 253-256.
  • Goldstein D.B., Roemer G.W., Smith D.A., Reich D.E., Bergman A. & Wayne R.K. (1999): The use of microsatellite variation to infer population structure and demographic history in a natural model system. Genetics 151, 797-801.
  • Estoup A., Jarne P. & Cornuet J.-M. (2002): Homoplasy and mutation model at microsatellite loci and their consequences for population genetics analysis. Molecular Ecology 11, 1591-1604.
  • Garner T.W.J. (2002): Genome size and microsatellites: the effect of nuclear size on amplification potential. Genome 45, 212-215.
  • Väli Ü, Einarsson A., Waits L. & Ellegren H. (2008): To what extent do microsatellite markers reflect genome-wide genetic diversity in natural populations? Molecular Ecology 17, 3808–3817.
  • Hoffman J.I. & Amos W. (2005): Microsatellite genotyping errors: detection approaches, common sources and consequences for paternal exclusion. Molecular Ecology 14, 599–612.

Chloroplastové mikrosatelity
  • Provan J., Powell W.,Hollingsworth P.M. (2001): Chloroplast microsatellites: new tools for studies in plant ecology and evolution. Trends in Ecology & Evolution 16, 142-147
  • Navascués M. & Emerson B.C. (2005): Chloroplast microsatellites: measures of genetic diversity and the effect of homoplasy. Molecular Ecology 14, 1333–1341.

Izolace mikrosatelitů
  • Hakki E.E. & Akkaya M.S. (2000): Microsatellite isolation using amplified fragment length polymorphism markers: no cloning, no screening. Molecular Ecology 9, 2149–2154
  • Zane L., Bargelloni L. & Patarnello T. (2002): Strategies for microsatellite isolation: a review. Molecular Ecology 11, 1-16.
  • Lian Ch., Zhou Z. & Hogetsu T. (2001): A simple method for developing microsatellite markers using amplified fragments of inter-simple sequence repeat (ISSR). Journal of Plant Research 114, 381-385.
  • Korpelainen H., Kostamo K. & Virtanen V. (2007): Microsatellite marker identification using genome screening and restriction-ligation. BioTechniques 42, 479-486

Technické a teoretické, software
  • Balloux F. & Lugon-Moulin N. (2002): The estimation of population differentiation with microsatellite markers. Molecular Ecology 11, 155-165.
  • Bruvo R., Michiels N.K., D'Souza T.G.& Schulenburg H. (2004): A simple method for the calculation of microsatellite genotype distances irrespective of ploidy level. Molecular Ecology 13, 2101–2106.
  • Dewoody J., Nason J.D. & Hipkins V.D.(2006): Mitigating scoring errors in microsatellite data from wild populations. Molecular Ecology Notes 6, 951–957.
  • Petit R.J., Deguilloux M.-F., Chat J., Grivet D., Garnier-Géré P. & Vendramin G.G. (2005): Standardizing for microsatellite length in comparisons of genetic diversity. Molecular Ecology 14, 885-890.
  • Markwith S.H., Stewart D.J. & Dyer J.L. (2006): Tetrasat: a program for the population analysis of allotetraploid microsatellite data. Molecular Ecology Notes 6, 586-589.
  • Olivier J. Hardy O.J., Charbonnel N., Freville H. & Heuertz M. (2003) Microsatellite allele sizes: a simple test to assess their significance on genetic differentiation. Genetics 163, 1467–1482.
Aktualizováno Úterý, 24 Březen 2009 09:59
 
 
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