Seznam publikací

2014

Ryšánek, D., Hrčková, K. & Škaloud, P. (accepted): Global ubiquity and local endemism of free-living terrestrial protists: phylogeographic assessment of the streptophyte alga Klebsormidium. Environmental Microbiology. [WEB]

Jurdíková, K., Kulichová, J., Bestová, H., Leliaert, F. & Škaloud, P. (accepted): Exploration of nuclear DNA markers for population structure assessment in the desmid Micrasterias rotata (Zygnematophyceae, Streptophyta). Journal of Eukaryotic Microbiology. [WEB]

Škaloud, P., Škaloudová, M., Procházková, A. & Němcová, Y. (2014) Morphological delineation and distribution patterns of four newly described species within the Synura petersenii species complex (Chrysophyceae, Stramenopiles). European Journal of Phycology 49: 213-229. [PDF]

Němcová, Y. (2014) Silica-scaled chrysophytes (Chrysophyceae, Stramenopiles) of the Istrian Peninsula (Slovenia, Croatia) – species flourishing in humid subtropical climate). Nordic Journal of Botany (in press). [PDF]

Škaloud, P., Němcová, Y., Pytela, J., Bogdanov, N.I., Bock, C. & Pickinpaugh, S.H. (2014): Planktochlorella nurekis, gen. et sp. nov. (Trebouxiophyceae, Chlorophyta), a novel coccoid green alga carrying significant biotechnological potential. Fottea 14: 53-62. [PDF]

Poulíčková, A., Mazalová, P., Vašut, R.J., Šarhanová, P., Neustupa, J. & Škaloud, P. (2014): DNA content variation and its significance in the evolution of the genus Micrasterias (Desmidiales, Streptophyta). Plos ONE 9: e86247. [PDF]

Valentova, J.V., Kleisner, K., Havlíček, J. & Neustupa, J. (2014): Shape differences between the faces of homosexual and heterosexual men. Archives of Sexual Behavior 43: 353-361. [PDF]

Svoboda, P., Kulichová, J. & Šťastný, J. (2014): Spatial and temporal community structure of desmids on a small spatial scale. Hydrobiologia 722: 291-303. [PDF]


2013

Eliáš, M., Neustupa, J., Pažoutová, M. & Škaloud, P. (2013): A case of taxonomic inflation in coccoid algae: Ellipsoidion parvum and Neocystis vischeri are conspecific with Neocystis (=Nephrodiella) brevis (Chlorophyta, Trebouxiophyceae). Phytotaxa 76: 15-27. [WEB]

Gaysina, L., Němcová, Y., Škaloud, P., Ševčíková, T. & Eliáš, M. (2013): Chloropyrula uraliensis gen. et sp. nov. (Trebouxiophyceae, Chlorophyta), a new green coccoid alga with a unique ultrastructure, isolated from soil in South Urals. Journal of Systematics and Evolution 51: 476-484. [PDF]

Kaufnerová, V. & Eliáš, M. (2013): The demise of the genus Scotiellopsis Vinatzer (Chlorophyta). Nova Hedwigia 97: 415-428. [PDF]

Muggia, L., Vančurová, L., Škaloud, P., Peksa, O., Wedin, M. & Grube, M. (2013): The symbiotic playground of lichen thalli – a highly flexible photobiont association in rock-inhabiting lichens. FEMS Microbiology Ecology 85:313–323. [PDF]

Neustupa, J. (2013): Patterns of symmetric and asymmetric morphological variation in unicellular green microalgae of the genus Micrasterias (Desmidiales, Viridiplantae). Fottea 13: 53-63. [PDF]

Neustupa, J., Němcová, Y., Veselá, J., Steinová, J. & Škaloud, P. (2013): Leptochlorella corticola gen. et sp. nov. and Kalinella apyrenoidosa sp. nov.: two novel Chlorella-like green microalgae (Trebouxiophyceae, Chlorophyta) from subaerial habitats. International Journal of Systematic and Evolutionary Microbiology 63: 377-387. [PDF]

Neustupa, J., Němcová, Y., Veselá, J., Steinová, J. & Škaloud, P. (2013): Parachloroidium gen. nov. (Trebouxiophyceae, Chlorophyta), a novel genus of coccoid green algae from subaerial corticolous biofilms. Phycologia 52: 411-421. [PDF]

Neustupa, J., Veselá, J. & Šťastný, J. (2013): Differential cell size structure of desmids and diatoms in the phytobenthos of peatlands. Hydrobiologia 709: 159-171. [PDF]

Němcová, Y. & Kreidlová, J. (2013): Two new species of Mallomonas (Chrysophyceae: Synurales): Mallomonas temonis and Mallomonas divida. Phytotaxa 87: 11-18. [PDF]

Němcová, Y., Kreidlová, J., Pusztai, M. & Neustupa, J. (2013): Mallomonas pumilio group (Chrysophyceae/Stramenopiles) – a revision based on the scale/scale-case morphology and analysis of scale shape. Nova Hedwigia, Beiheft 142: 27-49. [WEB]

Pichrtová, M., Němcová, Y., Škaloud, P. & Rott, E. (2013): Silica-scaled chrysophytes from North Tyrol (Austria) including a description of Mallomonas tirolensis sp. nov. Nova Hedwigia, Beiheft 142: 69-85. [WEB]

Pichrtová, M., Remias, D., Lewis, L. A. & Holzinger, A. (2013): Changes in phenolic compounds and cellular ultrastructure of Arctic and Antarctic strains of Zygnema (Zygnematophyceae, Streptophyta) after exposure to experimentally enhanced UV to PAR ratio. Microbial Ecology 65: 68-83. [PDF]

Poulíčková, A., Bergová, K., Hnilica, R. & Neustupa, J. (2013): Epibryic diatoms from ombrotrophic mires: diversity, gradients and indicating options. Nova Hedwigia 96: 351-365. [PDF]

Steinová, J., Stenroos, S., Grube, M. & Škaloud, P. (2013): Genetic diversity and species delimitation of the zeorin-containing red-fruited Cladonia species (lichenized Ascomycota) assessed with ITS rDNA and β-tubulin data. The Lichenologist 45: 665-684. [PDF]

Škaloud, P. & Rindi, F. (2013): Ecological differentiation of cryptic species within an asexual protist morphospecies: a case study of filamentous green alga Klebsormidium (Streptophyta). Journal of Eukaryotic Microbiology 60: 350-362. [PDF]

Škaloud, P., Kalina, T., Nemjová, K., De Clerck, O. & Leliaert, F. (2013): Morphology and phylogenetic position of the freshwater green microalgae Chlorochytrium (Chlorophyceae) and Scotinosphaera (Scotinosphaerales, ord. nov., Ulvophyceae). Journal of Phycology 49: 115-129. [PDF]

Škaloud, P., Kristiansen, J. & Škaloudová, M. (2013): Developments in the taxonomy of silica-scaled chrysophytes – from morphological and ultrastructural to molecular approaches (review). Nordic Journal of Botany 31: 385-402. [PDF]

Škaloud, P., Nedbalová, L., Elster, J. & Komárek, J. (2013): A curious occurrence of Hazenia broadyi spec. nova in Antarctica, and the review of the genus Hazenia (Ulotrichales, Chlorophyceae). Polar Biology 36: 1281-1291. [WEB]

Škaloud, P., Škaloudová, M., Pichrtová, M., Němcová, Y., Kreidlová, J. & Pusztai, M. (2013): www.chrysophytes.eu – a database on distribution and ecology of silica-scaled chrysophytes in Europe. Nova Hedwigia, Beiheft 142: 141-146. [PDF]

Škaloudová, M. & Škaloud, P. (2013): A new species of Chrysosphaerella (Chrysophyceae: Chromulinales), Chrysosphaerella rotundata, sp. nov., from Finland. Phytotaxa 130: 34-42. [PDF]

Šťastný, J., Škaloud, P., Langenbach, D., Nemjová, K. & Neustupa, J. (2013): Polyphasic evaluation of Xanthidium antilopaeum and Xanthidium cristatum (Zygnematophyceae, Streptophyta) species complex. Journal of Phycology 49: 401-416. [PDF]

Urbánková, P. & Veselá, J. (2013): DNA-barcoding: A case study in the diatom genus Frustulia (Bacillariophyceae). Nova Hedwigia, Beiheft 142: 147-162. [WEB]

Van de Vijver, B., Moravcová, A., Kusber, W.H. & Neustupa, J. (2013): Analysis of the type material of Pinnularia divergentissima (Grunow in Van Heurck) Cleve (Bacillariophyceae). Fottea 13: 1-14.


2012

Přibyl, P., Eliáš, M., Cepák, V., Lukavský, J. & Kaštánek, P. (2012): Zoosporogenesis, morphology, ultrastructure, pigment composition, and phylogenetic position of Trachydiscus minutus (Eustigmatophyceae, Heterokontophyta). Journal of Phycology 48: 231-242. [PDF]

Neustupa, J., Černá, K. & Šťastný, J. (2012): Spatio-temporal community structure of peat bog benthic desmids on a microscale. Aquatic Ecology 46: 229-239. [PDF]

Němcová, Y. & Pichrtová, M. (2012): Shape dynamics of silica scales (Chrysophyceae, Stramenopiles) associated with pH. Fottea 12: 281-291. [PDF]

Němcová, Y., Kreidlová, J., Kosová, A. & Neustupa, J. (2012): Lakes and pools of Aquitaine region (France) - a biodiversity hotspot of Synurales in Europe. Nova Hedwigia 95: 1-24. [PDF]

Škaloud, P., Kynčlová, A., Benada, O., Kofroňová, O. & Škaloudová, M. (2012): Toward a revision of the genus Synura, section Petersenianae (Synurophyceae, Heterokontophyta): morphological characterization of six pseudo-cryptic species. Phycologia 51: 303-329. [PDF]

Škaloud, P., Šťastný, J., Nemjová, K., Mazalová, P., Poulíčková, A. & Neustupa, J. (2012): Molecular phylogeny of baculiform desmid taxa (Zygnematophyceae). Plant Systematics and Evolution 298: 1281-1292. [PDF]

Šťastný, J. & Kouwets, F.A.C. (2012): New and remarkable desmids (Zygnematophyceae, Streptophyta) from Europe: taxonomical notes based on LM and SEM observations. Fottea 12: 293-313. [PDF]

Veselá, J., Urbánková, P., Černá, K. & Neustupa, J. (2012): Ecological variation within traditional diatom morphospecies: diversity of Frustulia rhomboides sensu lato (Bacillariophyceae) in European freshwater habitats. Phycologia 51: 552-561. [PDF]


2011

Banks, J.A., Nishiyama, T., Hasebe M. + 100 additional authors incl. Elias, M. (2011): The Selaginella genome identifies genetic changes associated with the evolution of vascular plants. Science 332: 960-963. [WEB]

Němcová, Y., Bulant, P. & Kristiansen, J. (2011): Mallomonas solea-ferrea and Mallomonas siveri (Chrysophyceae/Synurophyceae): two new taxa from the Western Cape (South Africa). Nova Hedwigia 93: 375-384. [PDF]

Němcová, Y., Eliáš, M., Škaloud, P., Hodač, L. & Neustupa, J. (2011): Jenufa, gen. nov.: a new genus of coccoid green algae (Chlorophyceae, incertae sedis) previously recorded by environmental sequencing. Journal of Phycology 47: 928-938. [PDF]

Nemjová, K., Neustupa, J., Šťastný, J., Škaloud, P. & Veselá, J. (2011): Species concept and morphological differentiation of strains traditionally assigned to Micrasterias truncata. Phycological Research 59: 208-220. [PDF]

Neustupa, J., Černá, K. & Šťastný, J. (2011): The effects of aperiodic desiccation on the diversity of benthic desmid assemblages in a lowland peat bog. Biodiversity and Conservation 20: 1695-1711. [PDF]

Neustupa, J., Eliáš, M., Škaloud, P., Němcová, Y. & Šejnohová, L. (2011): Xylochloris irregularis, gen. et sp. nov. (Trebouxiophyceae, Chlorophyta), a novel subaerial coccoid green alga. Phycologia 50: 57-66. [PDF]

Neustupa, J., Šťastný, J., Nemjová, K., Mazalová, P., Goodyer, E., Poulíčková, A. & Škaloud, P. (2011): A novel, combined approach to assessing species delimitation and biogeography within the well-known desmid species Micrasterias fimbriata and M. rotata (Desmidiales, Steptophyta). Hydrobiologia 667: 223-239. [PDF]

Peksa, O. & Škaloud, P. (2011): Do photobionts influence the ecology of lichens? A case study of environmental preferences in symbiotic green alga Asterochloris (Trebouxiophyceae). Molecular Ecology 20: 3936-3948. [PDF]

Pichrtová, M. & Němcová, Y. (2011): Effect of temperature on size and shape of silica scales in Synura petersenii and Mallomonas tonsurata (Stramenopiles). Hydrobiologia 673: 1-11. [PDF]

Pichrtová, M., Janatková, K. & Němcová, Y. (2011): Silica-scaled chrysophytes from Abisko (Swedish Lapland). Nordic Journal of Botany 29: 112-118. [PDF]

Škaloud, P., Nemjová, K., Veselá, J., Černá, K. & Neustupa, J. (2011): A multilocus phylogeny of the desmid genus Micrasterias (Streptophyta): Evidence for the accelerated rate of morphological evolution in protists. Molecular Phylogenetics and Evolution 61: 933-943. [PDF]

Sucgang, C. et al. incl. Eliáš, M. (2011): Comparative genomics of the social amoebae Dictyostelium discoideum and Dictyostelium purpureum. Genome Biology 12: R20. [PDF]

Svoboda, D., Peksa, O. & Veselá, J. (2011): Analysis of the species composition of epiphytic lichens in Central European oak forests. Preslia 83: 129-144. [WEB]

Veselá, J., Škaloud, P., Urbánková, P., Škaloudová, M. & Kalina, T. (2011:) The CAUP image database. Fottea 11: 313-316. [PDF]

Vlahou, G., Eliáš, M., von Kleist-Retzov, J.C., Wiesner, R.J. & Rivero, F. (2011): The Ras related GTPase Miro is not required for mitochondrial transport in Dictyostelium discoideum. European Journal of Cell Biology 90: 342-355. [PDF]


2010

Bačkor, M., Peksa, O., Škaloud, P. & Bačkorová, M. (2010): Photobiont diversity in lichens from metal-rich substrata based on ITS rDNA sequences. Ecotoxicology and Environmental Safety 73: 603-612. [PDF]

Černá, K. (2010): Small-scale spatial variation of benthic algal assemblages in a peat bog. Limnologica 40: 315-321. [PDF]

Černá, K. & Neustupa, J. (2010): The pH-related morphological variations of two acidophilic species of Desmidiales (Viridiplantae) isolated from a lowland peat bog, Czech Republic. Aquatic Ecology 44: 409-419. [PDF]

Cock, J.M., Sterck, L., Rouzé, P., Scornet, D. + 70 additional authors incl. Elias, M. (2010): The Ectocarpus genome and the independent evolution of multicellularity in brown algae. Nature 465: 617-621. [WEB]

Elias, M. (2010): Patterns and processes in the evolution of the eukaryotic endomembrane system. Molecular Membrane Biology 27: 469-489. [PDF]

Eliáš, M., Němcová, Y., Škaloud, P., Neustupa, J., Kaufnerová, V. & Šejnohová, L. (2010): Hylodesmus singaporensis gen. et sp. nov., a new autosporic subaerial green alga (Scenedesmaceae, Chlorophyta) from Singapore. International Journal of Systematic and Evolutionary Microbiology 60: 1224-1235. [PDF]

Kynčlová, A., Škaloud, P. & Škaloudová, M. (2010): Unveiling hidden diversity in the Synura petersenii species complex (Synurophyceae, Heterokontophyta). Nova Hedwigia, Beiheft 136: 283-298. [PDF]

Němcová, Y. (2010): Diversity and ecology of silica-scaled chrysophytes (Synurophyceae, Chrysophyceae) in the National Nature Monument Swamp and Brehynsky Pond, Czech Republic. Cryptogamie, Algologie 31: 229-243. [PDF]

Němcová, Y., Neustupa, J., Kvíderová, J. & Řezáčová-Škaloudová, M. (2010): Morphological plasticity of silica scales of Synura echinulata (Synurophyceae) in crossed gradients of light and temperature – a geometric morphometric approach. Nova Hedwigia, Beiheft 136: 21-32. [WEB]

Neustupa, J. & Škaloud, P. (2010): Diversity of subaerial algae and cyanobacteria growing on bark and wood in the lowland tropical forests of Singapore. Plant Ecology and Evolution 143: 51-62. [PDF]

Neustupa, J., Řezáčová-Škaloudová, M. & Němcová, Y. (2010): Shape variation of the silica scales of Mallomonas kalinae (Mallomonadales, Synurophyceae) in relation to their position on the cell body. Nova Hedwigia, Beiheft 136: 33-42. [WEB]

Neustupa, J., Škaloud, P. & Šťastný, J. (2010): The molecular phylogenetic and geometric morphometric evaluation of Micrasterias crux-melitensis / M. radians species complex. Journal of Phycology 46: 703-714. [PDF]

Pažoutová, M., Škaloud, P. & Nemjová, K. (2010): Phylogenetic position of Ooplanctella planoconvexa gen. et comb. nova and Echinocoleum elegans (Oocystaceae, Trebouxiophyceae, Chlorophyta). Fottea 10: 75-82. [PDF]

Poulíčková, A., Veselá, J., Neustupa, J. & Škaloud, P. (2010): Pseudocryptic diversity versus cosmopolitanism in diatoms: a case study on Navicula cryptocephala Kütz. (Bacillariophyceae) and morphologically similar taxa. Protist 161: 353-369. [PDF]

Řezáčová-Škaloudová, M., Neustupa, J. & Němcová, Y. (2010): Effect of temperature on the variability of silicate structures in Mallomonas kalinae and Synura curtispina (Synurophyceae). Nova Hedwigia, Beiheft 136: 55-70. [WEB]

Savriama, Y., Neustupa, J. & Klingenberg, C.P. (2010): Geometric morphometrics of symmetry and allometry in Micrasterias rotata (Zygnemophyceae, Viridiplantae). Nova Hedwigia, Beiheft 136: 43-54. [WEB]

Skaloud, P. & Peksa, O. (2010): Evolutionary inferences based on ITS rDNA and actin sequences reveal extensive diversity of the common lichen alga Asterochloris (Trebouxiophyceae, Chlorophyta). Molecular Phylogenetics and Evolution 54: 36-46. [PDF]

Šťastný, J. (2010): Desmids (Conjugatophyceae, Viridiplantae) from the Czech Republic; new and rare taxa, distribution, ecology. Fottea 10: 1-74. [PDF]

Svoboda, D., Peksa, O. & Veselá, J. (2010): Epiphytic lichen diversity in Central European oak forests: Assessment of the effects of natural environmental factors and human influences. Environmental Pollution 158: 812-819. [PDF]


2009

Elias, M. & Archibald, J.M. (2009): Sizing up the genomic footprint of endosymbiosis. BioEssays 31: 1273-1279. [PDF]

Elias, M. & Archibald, J.M. (2009): The RJL family of small GTPases is an ancient eukaryotic invention probably functionally associated with the flagellar apparatus. Gene 442: 63-72. [WEB]

Eliáš, M. & Neustupa, J. (2009): Pseudomarvania, gen. nov. (Chlorophyta, Trebouxiophyceae), a new genus for “budding” subaerial green algae Marvania aerophytica Neustupa et Šejnohová and Stichococcus ampulliformis Handa. Fottea 9: 169-177. [PDF]

Elias, M., Patron, N.J. & Keeling, P.J. (2009): The RAB family GTPase Rab1A from Plasmodium falciparum defines a unique paralog shared by chromalveolates and Rhizaria. Journal of Eukaryotic Microbiology 56: 348-356. [WEB]

Fránková, M., Poulíčková, A., Neustupa, J., Pichrtová, M. & Marvan, P. (2009): Geometric morphometrics - a sensitive method to distinguish diatom morphospecies: a case study on the sympatric populations of Reimeria sinuata and Gomphonema tergestinum (Bacillariophyceae) from the River Bečva, Czech Republic. Nova Hedwigia 88: 81-95. [WEB]

Janatková, K. & Němcová, Y. (2009): Silica-scaled chrysophytes of Southern Bohemian water bodies, including Mallomonas conspersa Dürrschmidt with occurrence so far reported from Japan and New Zealand. Fottea 9: 93-99. [PDF]

Ma, L.J., Ibrahim, A.S., Skory, C., Grabherr, M.G., Burger, G., Butler, M., Elias, M. et al. (2009): Genomic analysis of the basal lineage fungus Rhizopus oryzae reveals a whole-genome duplication. PLoS Genetics 5: e1000549. [PDF]

Machová-Černá, K., Neustupa, J. (2009): Spatial distribution of algal assemblages in a temperate lowland peat bog. International Review of Hydrobiology 94: 40-56. [PDF]

Němcová, Y. & Pichrtová, M. (2009): The rare species Synura lapponica (Synurophyceae) new to the Czech Republic, local vs. global diversity in colonial synurophytes. Biologia 64: 1070-1075. [PDF]

Nemjová, K. & Kaufnerová, V. (2009): New reports of Vaucheria species (Vaucheriales, Xanthophyceae, Heterokontophyta) from the Czech Republic. Fottea 9: 53-57. [PDF]

Neustupa, J., Černá, K. & Šťastný, J. (2009): Diversity and morphological disparity of desmid assemblages in Central European peatlands. Hydrobiologia 630: 243-256. [PDF]

Neustupa, J., Němcová, Y., Eliáš, M. & Škaloud, P. (2009): Kalinella bambusicola gen. et sp. nov. (Trebouxiophyceae, Chlorophyta), a novel coccoid Chlorella-like subaerial alga from Southeast Asia. Phycological Research 57: 159-169. pdf

Pichrtová, M. & Veselá, J. (2009): The silica-scaled chrysophytes of the Elbe Sandstone Region, Czech Republic. Fottea 9: 101-106. [PDF]

Píšková, A., Grygar, T., Veselá, J. & Oberhänsli, H. (2009): Diatom assemblage variations in the Aral Sea core C2/2004 over the past two millennia. Fottea 9: 333-342. [PDF]

Poulíčková, A., Neustupa, J., Špačková, J. & Škaloud, P. (2009): Distribution of epipelic diatoms in artificial fishponds along environmental and spatial gradients. Hydrobiologia 624: 81-90. [WEB]

Prášil, O., Bína, D., Medová, H., Řeháková, K., Zapomělová, E., Veselá, J. & Oren, A. (2009): Emission spectroscopy and kinetic fluorometry studies of the phototrophic microbial communities along the salinity gradient in the solar saltern evaporation ponds of Eilat, Israel. Aquatic Microbial Ecology 56: 285-296. [PDF]

Řeháková, K., Zapomělová, E., Prášil, O., Veselá, J., Medová, H. & Oren, A. (2009): Composition changes of phototrophic microbial communities along the salinity gradient in the solar saltern evaporation ponds of Eilat, Israel. Hydrobiologia 636: 77-88. [WEB]

Škaloud, P. (2009): Species composition and diversity of aero-terrestrial algae and cyanobacteria of the Boreč Hill ventaroles. Fottea 9: 65-80. [PDF]

Šťastný, J. (2009): The desmids of the Swamp Nature Reserve (North Bohemia, Czech Republic) and a small neighbouring bog: species composition and ecological condition of both sites. Fottea 9: 135-148. [PDF]

Veselá, J. (2009): Spatial heterogeneity and ecology of algal communities in an ephemeral sandstone stream in the Bohemian Switzerland National Park, Czech Republic. Nova Hedwigia 88: 531-547. [WEB]

Veselá, J. & Johansen, J. (2009): The diatom flora of ephemeral headwater streams in the Elbsandsteingebirge region of the Czech Republic. Diatom Research 24: 443-477. [PDF]

Veselá, J., Neustupa, J., Pichrtová, M. & Poulíčková A. (2009): Morphometric study of Navicula morphospecies (Bacillariophyta) with respect to diatom life cycle. Fottea 9: 307-316. [PDF]


2008

Eliáš, M. (2008): The guanine nucleotide exchange factors Sec2 and PRONE: Candidate synapomorphies for the Opisthokonta and the Archaeplastida. Molecular Biology and Evolution 25: 1526-1529. [PDF]

Eliáš, M. & Novotný, M. (2008): cpRAS: a novel circularly permuted RAS-like GTPase domain with a highly scattered phylogenetic distribution. Biology Direct 3: 21. [PDF]

Eliáš, M., Neustupa, J. & Škaloud, P. (2008): Elliptochloris bilobata var. corticola var. nov. (Trebouxiophyceae, Chlorophyta), a novel subaerial coccal green alga. Biologia 63: 787-794. [PDF]

Hašler, P., Štěpánková, J., Špačková, J., Neustupa, J., Kitner, M., Hekera, P., Veselá, J., Burian, J. & Poulíčková, A. (2008): Epipelic cyanobacteria and algae: a case study from Czech ponds. Fottea 8: 133-146. [PDF]

Machová, K., Elster, J. & Adamec, L. (2008): Xanthophyceaen assemblages during winter–spring flood: autecology and ecophysiology of Tribonema fonticolum and T. monochloron. Hydrobiologia 600: 155-168. [PDF]

Němcová, Y., Nováková, S. & Řezáčová-Škaloudová, M. (2008): Synura obesa sp. nov. (Synurophyceae) and other silica-scaled chrysophytes from Abisko (Swedish Lapland). Nova Hedwigia 86: 243-254. [WEB]

Neustupa, J. & Nemjová, K. (2008): Quantitative assessment of morphological variation of six Pseudococcomyxa strains by geometric morphometric descriptors. Fottea 8: 111-116. [PDF]

Neustupa, J. & Škaloud, P. (2008): Diversity of subaerial algae and cyanobacteria on tree bark in tropical mountain habitats. Biologia 63: 802-808. [PDF]

Neustupa, J., Šťastný, J. & Hodač, L. (2008): Temperature-related phenotypic plasticity in the green microalga Micrasterias rotata. Aquatic Microbial Ecology 51: 77-86. [PDF]

Peksa, O. & Škaloud, P. (2008): Changes in chloroplast structure in lichenized algae. Symbiosis 46: 153-160. [PDF]

Pichrtová, M. & Němcová, Y. (2008): Geometric morphometric analyses of silica-scale variation in four Mallomonas species (Synurophyceae, Stramenopiles). Nordic Journal of Botany 26: 77-82. [PDF]

Škaloud, P. & Peksa, O. (2008): Comparative study of chloroplast morphology and ontogeny in Asterochloris (Trebouxiophyceae, Chlorophyta). Biologia 63: 869-876. [PDF]

Šťastný, J. (2008): Desmids from ephemeral pools and aerophytic habitats from the Czech Republic. Biologia 63: 884-890. [PDF]

Šťastný, J. (2008): Krásivky Přírodních rezervací "Chvojnov" a "Na Oklice". Acta Rerum Naturalium 4: 13-16. [PDF]

Šťastný, J. & Lenzenweger, R. (2008): Ein Nachtrag zur Zieralgenflora (Desmidiales, Zygnematophyceae) der Schwemm bei Walchsee in Nordtirol (Österreich). Phyton 48: 37-49. [PDF]

Šťastný, J. & Neustupa, J. (2008): Cosmarium gauthierae sp. nov. (Conjugatophyceae, Desmidiales) from an ephemeral pool in South-West Macedonia. Cryptogamie Algologie 29: 255-260. [PDF]


2007

Merchant, S.S., Prochnik, S.E., Vallon, O., Harris, E.H., Karpowicz, S.J., Witman, G.B. + 117 additional authors incl. Eliáš, M. (2007): The Chlamydomonas genome reveals the evolution of key animal and plant functions. Science 318: 245-250. [PDF]

Neustupa, J., Eliáš, M. & Šejnohová, L. (2007): A taxonomic study of two Stichococcus species (Trebouxiophyceae, Chlorophyta) with a starch-enveloped pyrenoid. Nova Hedwigia 84: 51-63. [WEB]

Neustupa, J. & Němcová, Y. (2007): A geometric morphometric study of the variation in scales of Mallomonas striata (Synurophyceae, Heterokontophyta). Phycologia 46: 123-130. [PDF]

Neustupa, J. & Řezáčová, M. (2007): The genus Mallomonas (Mallomonadales, Synurophyceae) in several Southeast Asian urban water bodies - the biogeographic implications. Nova Hedwigia 84: 249-259. [WEB]

Neustupa, J. & Škaloud, P. (2007): Geometric morphometrics and qualitative patterns in the morphological variation of five species of Micrasterias (Zygnemophyceae, Viridiplantae). Preslia 79: 401-417. [PDF]

Nováková, S. (2007): Structure and dynamics of the algal flora in subalpine mires in the Krkonoše Mountains (Giant Mountains; Czech Republic). Nova Hedwigia 84: 441-458. [WEB]

Pichrtová, M., Řezáčová-Škaloudová, M. & Škaloud, P. (2007): The silica-scaled chrysophytes of the Czech-Moravian Highlands. Fottea 7: 43-48. [PDF]

Řezáčová, M. & Neustupa, J. (2007): Distribution of the genus Mallomonas (Synurophyceae) - Ubiquitous dispersal in microorganisms evaluated. Protist 158: 29-37. [PDF]

Šťastný, J. (2007): Die Desmidiaceenflora von Pískovny Cep (Südböhmen). Novitates Botanicae Universitatis Carolinae 18: 53-62. [PDF]


2006

Neustupa, J. & Šťastný, J. (2006): The geometric morphometric study of Central European species of the genus Micrasterias (Zygnematophyceae, Viridiplantae). Preslia 78: 253-263. [PDF]

Řezáčová, M. (2006): Mallomonas kalinae (Synurophyceae), a new species of alga from northern Bohemia, Czech Republic. Preslia 78: 353-358. [PDF]

Škaloud, P. (2006): Variation and taxonomic significance of some morphological features in European strains of Klebsormidium (Klebsormidiophyceae, Streptophyta). Nova Hedwigia 83: 533-550. [WEB]

Škaloud, P., Řezáčová, M. & Ellegaard, M. (2006): Spatial distribution of phytoplankton in Spring 2004 along a transect in the eastern part of the North Sea. Journal of Oceanography 62: 717-729. [PDF]

Veselá, J. (2006): Benthic algal communities and their ecology in sandstone periodically desiccated brook in National Park Bohemian Switzerland (Czech Republic). Czech Phycology 6: 99-110. [PDF]


2005

Kalina, T. (2005): New trends in the megasystems of Eukaryote (Review). Czech Phycology 5: 37-42. [PDF]

Neustupa, J. (2005): Investigations on the genus Phycopeltis (Trentepohliaceae, Chlorophyta) from South-East Asia, including the description of two new species. Cryptogamie Algologie 26: 229-242. [PDF]

Neustupa, J. (2005): Phenotypic plasticity of microalgal cultures in culture collections: a geometric morphometric appproach. Oceanological and Hydrobiological Studies 34: 97-107. [PDF]

Neustupa, J. & Hodač, L. (2005): Changes in shape of the coenobial cells of an experimental strain of Pediastrum duplex var. duplex (Chlorophyta) reared at different pHs. Preslia 77: 439-452. [PDF]

Nováková, S. (2005): Pseudocarteria corcontica, a new quadriflagellate species (Volvocales). Preslia 77: 453–457. [PDF]

Řezáčová, M. & Škaloud, P. (2005): Silica-scaled chrysophytes of Ireland. With an appendix: Geographic variation of scale shape of Mallomonas caudata. Nova Hedwigia, Beiheft 128: 101-124. [PDF]

Škaloud, P., Neustupa, J., Radochová, B., Kubínová, L. (2005): Confocal microscopy of chloroplast morphology and ontogeny in three strains of Dictyochloropsis (Trebouxiophyceae, Chlorophyta). Phycologia 44: 261-269. [PDF]


2004

Neustupa, J. (2004): Two new aerophytic species of the genus Podohedra Düringer (Chlorophyceae). Archiv für Hydrobiologie/ Algological Studies 112: 1-16.

Neustupa, J. & Škaloud, P. (2004): Contribution to the knowledge of soil algae of two abandoned industrial sedimentation basins in Eastern Bohemia. In: Kovář, P. (ed.), Natural recovery of man-made deposits in landscape (Biotic interactions and ore/ash-slag artificial ecosystems). - pp. 188-192, Academia, Praha. [PDF]

Nováková, S. (2004): Spatial heterogeneity of the algal flora in subalpine mires in the eastern Krkonoše Mts (Giant Mountains; Czech Republic). Archiv für Hydrobiologie/ Algological Studies 112: 23-37.

Nováková, S., Němcová, Y., Neustupa, J., Řezáčová, M. & Šejnohová, L. (2004): Silica-scaled chrysophytes in acid peat bogs of Bohemian Switzerland (Czech Republic) and Saxonian Switzerland (Germany). Nova Hedwigia 78: 507-515. [WEB]

Nováková, S., Řezáčová, M., Němcová, Y., Neustupa, J. & Kalina, T. (2004): Mallomonas actinoloma var. maramuresensis (Synurophyceae) - a new species in algal flora of the Czech Republic. Novitates Botanicae Universitatis Carolinae 17: 7-10. [PDF]

Nováková, S., Walne, P.L., Kalina, T. (2004): Contribution to the desmid flora of the Southern Appalachian Mountains (USA). Archiv für Hydrobiologie/ Algological Studies 112: 95-104.

Řezáčová, M., Neustupa, J. & Šejnohová, L. (2004): Five species of Mallomonas (Synurophyceae) new to the algal flora of the Czech Republic. Preslia 76: 175-181. [PDF]

Řezáčová, M. & Škaloud, P. (2004): A contribution to the knowledge of the silica-scaled chrysophytes in eastern Hungary. Czech Phycology 4: 67-73. [PDF]

Škaloud, P. & Radochová, B. (2004): Confocal microscopy of the green-algal chloroplast. Czech Phycology 4: 183-190. [PDF]


2003

Němcová, Y. (2003): Detection of cell wall structural polysaccharides by cellulase-gold and chitinase-gold complexes. Czech Phycology 3: 3-36. [PDF]

Němcová, Y., Neustupa, J., Kalina, T. & Nováková, S. (2003): Silica-scaled chrysophytes of the Šumava National Park and the Třeboňsko UNESCO Biosphere Reserve (Southern Bohemia, Czech Republic). Nordic Journal of Botany 22: 375-383. [PDF]

Němcová, Y., Neustupa, J., Kalina, T. & Nováková, S. (2003): Silica-scaled chrysophytes of the Czech Republic. Acta Universitatis Carolinae - Biologica 47: 285-346.

Neustupa, J. (2003): The genus Phycopeltis (Trentepohliales, Chlorophyta) from tropical Southeast Asia. Nova Hedwigia 76: 487-505. [WEB]

Neustupa, J. & Albrechtová, J. (2003): Aerial algae on spruce needles in the Krušné hory Mts., Czech Republic. Czech Phycology 3: 161-167. [PDF]

Neustupa, J. & Šejnohová, L. (2003): Marvania aerophytica sp. nov., a new subaerial green alga. Biologia 58: 503-507. [PDF]

Nováková, S. (2003): Algoflóra rašelinišť Českosaského Švýcarska. Czech Phycology 3: 71-78.

Nováková, S. (2003): Ecological distribution patterns of desmid species in subalpine regions of the Krkonoše Mountains (Czech Republic). Biologia 58: 697-700.

Pfannenschmid, F., Wimmer, V.C., Rios, R.M., Geimer, S., Haller, K., Němcová, Y. & Mages, W. (2003): Chlamydomonas DIP13 and human NA14: a new class of proteins associated with microtubule structures is involved in cell division. Journal of Cell Science 116: 1449-1462. [PDF]

Šejnohová, L. (2003): Sinice a řasy slepých ramen Vltavy v I. zóně Šumavského Národního parku "Vltavský luh". Czech Phycology 3: 53-70

Šejnohová, L., Škaloud, P., Neustupa, J., Nováková, S., Řezáčová, M. & Ošlejšková, L. (2003): Algae and cyanoprokaryotic species from peat bog, streams, ponds and aerial biotopes in the region of South Šumava Mts. Czech Phycology 3: 41-52. [PDF]


2002

Neustupa, J. (2002): An easy method for light microscopic distinguishing of xanthophycean and eustigmatophycean strains. Czech Phycology 2: 43-46. [PDF]

Neustupa, J., Nováková, S., Šejnohová, L., Škaloud, P. & Řezáčová, M. (2002): Algae from the aquatic, peat bog and aerial biotopes in the tributary of Křemelná river in Šumava National Park. Czech Phycology 2: 47-61. [PDF]

Nováková, S. (2002): Algal flora of subalpine peat bog pools in the Krkonoše Mts. Preslia 74: 45-56. [PDF]

Nováková, S. (2002): Pseudodendromonas vlkii - poutník po systému. Czech Phycology 2: 33-37. [PDF]


2001

Kalina, T. (2001): Původ chloroplastů a zařazení řasových oddělení do systému organismů. Czech Phycology 1: 1-4. [PDF]

Kalina, T., Walne, P. & Houk, V. (2001): Floristic notes on plankton algae of Norris Lake (Tennessee, USA). Preslia 73: 121-126.

Němcová, Y., Kalina, T., Neustupa, J. & Nováková, S. (2001): Silica-scaled chrysophytes of the Krkonoše Mountains (Czech Republic). Archiv für Hydrobiologie/ Algological Studies 101: 97-108.

Neustupa, J. (2001): Soil algae from marlstone-substratum based biotopes in the Nature park Džbán (Central Bohemia, Czech Republic) with special attention to the natural treeless localities. Archiv für Hydrobiologie/ Algological Studies 101: 109-120.

Neustupa, J. (2001): Aerofytické řasy tropického deštného lesa - zkušenosti z Malajského poloostrova. Czech Phycology 1: 31-35. [PDF]

Neustupa, J. & Němcová, Y. (2001): Morphological and taxonomic study of three terrestrial eustigmatophycean species. Nova Hedwigia, Beiheft 123: 373-386.

Neustupa, J., Němcová, Y. & Kalina, T. (2001): Silica-scaled Chrysophytes of Southern Bohemia and Českomoravská vrchovina (Czech-Moravian Highlands, Czech Republic). Archiv für Hydrobiologie/ Algological Studies 102: 23-34.


2000

Kalina, T., Němcová, Y. & Neustupa, J. (2000): Silica-scaled chrysophytes of the Czech Republic 1. District Česká Lípa (Nothern Bohemia) and part of the Central Bohemia. Archiv für Hydrobiologie/ Algological Studies 96: 29-47.

Němcová, Y. & Kalina, T. (2000): Cell wall development, microfibril and pyrenoid structure in type strains of Chlorella vulgaris, C. kessleri, C. sorokiniana compared with C. luteoviridis (Trebouxiophyceae, Chlorophyta). Archiv für Hydrobiologie/ Algological Studies 100: 95-105. [PDF]

Němcová, Y., Kalina, T. & Neustupa, J. (2000): Chrysomonády a slunivky s křemičitými šupinami montánních a subalpinských rašelinišť Krkonoš. Opera Corcontica 37: 334-340. [PDF]

Němcová, Y., Kalina, T., Neustupa, J. & Nováková, S. (2000): Scale-bearing chrysophyte Mallomonas calceolus Bradley a new record from Czech Republic. Novitates Botanicae Universitatis Carolinae 13: 7-11. [PDF]

Neustupa, J., Němcová, Y. & Kalina, T. (2000): Mallomonas pumilio var. pumilio - a new species in algal flora of Czech Republic. Novitates Botanicae Universitatis Carolinae 14: 7-11. [PDF]

Nováková, S. (2000): Řasy krkonošských rašelinišť. Opera Corcontica 37: 341-346. [PDF]


1999

Němcová, Y. (1999): The fine structure of the xanthophycean alga Bumilleriopsis filiformis. Acta Universitatis Carolinae - Biologica 43: 67-76.


1998

Neustupa, J. (1998): Prasiola crispa (Lightfoot) Meneghini in King`s preserve in Prague. Novitates Botanicae Universitatis Carolinae 12: 35-39. [PDF]